Cuando necesites desactivar un plug in o tema desde wp-cli puedes usar los siguientes comandos:
wp help plugin --allow-root
wp plugin <command>
SYNOPSIS
wp plugin <command>
SUBCOMMANDS
activate Activates one or more plugins.
deactivate Deactivates one or more plugins.
delete Deletes plugin files without deactivating or uninstalling.
get Gets details about an installed plugin.
install Installs one or more plugins.
is-active Checks if a given plugin is active.
is-installed Checks if a given plugin is installed.
list Gets a list of plugins.
path Gets the path to a plugin or to the plugin directory.
search Searches the WordPress.org plugin directory.
status Reveals the status of one or all plugins.
toggle Toggles a plugin’s activation state.
uninstall Uninstalls one or more plugins.
update Updates one or more plugins.
verify-checksums Verifies plugin files against WordPress.org’s checksums.
wp theme <command>
activate Activates a theme.
delete Deletes one or more themes.
disable Disables a theme on a WordPress multisite install.
enable Enables a theme on a WordPress multisite install.
get Gets details about a theme.
install Installs one or more themes.
is-active Checks if a given theme is active.
is-installed Checks if a given theme is installed.
list Gets a list of themes.
mod Sets, gets, and removes theme mods.
path Gets the path to a theme or to the theme directory.
search Searches the WordPress.org theme directory.
status Reveals the status of one or all themes.
update Updates one or more themes.
También puedes usar
wp plugin deactivate --all
Lo que hice
root@Reevolutiva:/var/www/html/wp-content/themes# wp theme disable buddyboss-theme --allow-root
Success: Disabled the 'BuddyBoss Theme' theme.
root@Reevolutiva:/var/www/html/wp-content/themes# wp theme activate twentytwentyone --allow-root
Success: Switched to 'Twenty Twenty-One' theme.
root@Reevolutiva:/var/www/html/wp-content/themes# wp theme disable twentytwentyone --allow-root
Success: Disabled the 'Twenty Twenty-One' theme.
root@Reevolutiva:/var/www/html/wp-content/themes# wp theme activate buddyboss-theme --allow-root
Success: Switched to 'BuddyBoss Theme' theme.
root@Reevolutiva:/var/www/html/wp-content/themes# wp theme activate buddyboss-theme --allow-root